I’m new to PyMC3 and have previously been using JAGS. To convert over to PyMC3 I wanted to convert a previous JAGS script of mine, but have been having many difficulties… here is a simplified diagram of the hierarchical model I want. [image] The 50 ref…

You can get around the for loop by just using subj as an index: z = pm.Bernoulli('z', pt, shape=ntrials) mn = pm.math.switch(z, m[:, 0] + mushift[subj], m[:, 1] The unobserved bernoulli is not such a great idea however, because you can’t use just nuts if you have unobserved discrete parameters. Th…

Help translating from JAGS to PyMC3

Questions

aseyboldt August 21, 2019, 2:36pm 4

Can you post example data for the variables? I don’t get it yet.

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Help translating from JAGS to PyMC3

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