my issue seems to be with getting Theano installed and working properly. after installing pymc3 as recommended, I get the errors below when trying to import theano
(base) PS C:\WINDOWS\system32> conda install -c conda-forge pymc3
Collecting package metadata (repodata.json): done
Solving environment: done
Package Plan
environment location: C:\Users\amarion\AppData\Local\Continuum\anaconda3
added / updated specs:
- pymc3
The following packages will be downloaded:
package | build
---------------------------|-----------------
ca-certificates-2019.11.28 | hecc5488_0 182 KB conda-forge
certifi-2019.11.28 | py36_0 148 KB conda-forge
conda-4.8.0 | py36_1 3.0 MB conda-forge
libgpuarray-0.7.6 | hfa6e2cd_1003 314 KB conda-forge
mako-1.1.0 | py_0 57 KB conda-forge
openssl-1.1.1d | hfa6e2cd_0 4.7 MB conda-forge
pygpu-0.7.6 |py36h452e1ab_1000 583 KB conda-forge
pymc3-3.7 | py_0 649 KB conda-forge
theano-1.0.4 |py36h6538335_1000 3.7 MB conda-forge
vs2015_win-64-14.0.25420 | h55c1224_11 6 KB
------------------------------------------------------------
Total: 13.3 MB
The following NEW packages will be INSTALLED:
libgpuarray conda-forge/win-64::libgpuarray-0.7.6-hfa6e2cd_1003
mako conda-forge/noarch::mako-1.1.0-py_0
pygpu conda-forge/win-64::pygpu-0.7.6-py36h452e1ab_1000
pymc3 conda-forge/noarch::pymc3-3.7-py_0
theano conda-forge/win-64::theano-1.0.4-py36h6538335_1000
vs2015_win-64 pkgs/main/win-64::vs2015_win-64-14.0.25420-h55c1224_11
The following packages will be UPDATED:
ca-certificates pkgs/main::ca-certificates-2019.11.27~ → conda-forge::ca-certificates-2019.11.28-hecc5488_0
The following packages will be SUPERSEDED by a higher-priority channel:
certifi pkgs/main → conda-forge
conda pkgs/main → conda-forge
openssl pkgs/main::openssl-1.1.1d-he774522_3 → conda-forge::openssl-1.1.1d-hfa6e2cd_0
Proceed ([y]/n)? y
Downloading and Extracting Packages
vs2015_win-64-14.0.2 | 6 KB | ################################################################################################################################################################################################# | 100%
libgpuarray-0.7.6 | 314 KB | ################################################################################################################################################################################################# | 100%
mako-1.1.0 | 57 KB | ################################################################################################################################################################################################# | 100%
pymc3-3.7 | 649 KB | ################################################################################################################################################################################################# | 100%
ca-certificates-2019 | 182 KB | ################################################################################################################################################################################################# | 100%
pygpu-0.7.6 | 583 KB | ################################################################################################################################################################################################# | 100%
certifi-2019.11.28 | 148 KB | ################################################################################################################################################################################################# | 100%
theano-1.0.4 | 3.7 MB | ################################################################################################################################################################################################# | 100%
openssl-1.1.1d | 4.7 MB | ################################################################################################################################################################################################# | 100%
conda-4.8.0 | 3.0 MB | ################################################################################################################################################################################################# | 100%
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
(base) PS C:\WINDOWS\system32> python
Python 3.6.5 |Anaconda, Inc.| (default, Mar 29 2018, 13:32:41) [MSC v.1900 64 bit (AMD64)] on win32
Type “help”, “copyright”, “credits” or “license” for more information.
import theano
You can find the C code in this temporary file: C:\Users\ADMIN-~2\AppData\Local\Temp\theano_compilation_error_44wsaxn_
Traceback (most recent call last):
File “C:\Users\amarion\AppData\Local\Continuum\anaconda3\lib\site-packages\theano\gof\lazylinker_c.py”, line 81, in
actual_version, force_compile, _need_reload))
ImportError: Version check of the existing lazylinker compiled file. Looking for version 0.211, but found None. Extra debug information: force_compile=False, _need_reload=True
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File “C:\Users\amarion\AppData\Local\Continuum\anaconda3\lib\site-packages\theano\gof\lazylinker_c.py”, line 105, in
actual_version, force_compile, _need_reload))
ImportError: Version check of the existing lazylinker compiled file. Looking for version 0.211, but found None. Extra debug information: force_compile=False, _need_reload=True
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File “”, line 1, in
File “C:\Users\amarion\AppData\Local\Continuum\anaconda3\lib\site-packages\theano_init_.py”, line 110, in
from theano.compile import (
File “C:\Users\amarion\AppData\Local\Continuum\anaconda3\lib\site-packages\theano\compile_init_.py”, line 12, in
from theano.compile.mode import *
File “C:\Users\amarion\AppData\Local\Continuum\anaconda3\lib\site-packages\theano\compile\mode.py”, line 11, in
import theano.gof.vm
File “C:\Users\amarion\AppData\Local\Continuum\anaconda3\lib\site-packages\theano\gof\vm.py”, line 674, in
from . import lazylinker_c
File “C:\Users\amarion\AppData\Local\Continuum\anaconda3\lib\site-packages\theano\gof\lazylinker_c.py”, line 140, in
preargs=args)
File “C:\Users\amarion\AppData\Local\Continuum\anaconda3\lib\site-packages\theano\gof\cmodule.py”, line 2396, in compile_str
(status, compile_stderr.replace(‘\n’, '. ‘)))
. C:/Users/amarion/AppData/Local/Continuum/anaconda3/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:1470: undefined reference to __imp_PyExc_. C:/Users/amarion/AppData/Local/Continuum/anaconda3/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:1476: undefined reference to
_imp_PyExc. C:/Users/amarion/AppData/Local/Continuum/anaconda3/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:1481: undefined reference to __imp_PyCaps. C:/Users/amarion/AppData/Local/Continuum/anaconda3/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:1482: undefined reference to
_imp_PyExc. C:/Users/amarion/AppData/Local/Continuum/anaconda3/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:1497: undefined reference to __imp_PyExc_. C:/Users/amarion/AppData/Local/Continuum/anaconda3/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:1505: undefined reference to
_imp_PyExc. C:/Users/amarion/AppData/Local/Continuum/anaconda3/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:1511: undefined reference to __imp_PyExc_. C:/Users/amarion/AppData/Local/Continuum/anaconda3/lib/site-packages/numpy/core/include/numpy/__multiarray_api.h:1521: undefined reference to
_imp_PyExc. C:\Users\ADMIN-~2\AppData\Local\Temp\ccOxLJig.o:C:/Users/amarion/AppData/Local/Continuum/anaconda3/lib/site-packages/numpy/core/include/numpy/_multiarray. C:/Users/amarion/AppData/Local/Continuum/anaconda3/lib/site-packages/numpy/core/include/numpy/npy_3kcompat.h:460: undefined reference to `__imp_PyCapsule_T. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:\Users\ADMIN-~2\AppData\Local\Temp\ccOxLJig.o:C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:\Users\ADMIN-~2\AppData\Local\Temp\ccOxLJig.o:C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:\Users\ADMIN-~2\AppData\Local\Temp\ccOxLJig.o:C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. C:/Users/admin-amarion/AppData/Local/Theano/compiledir_Windows-10-10.0.17763-SP0-Intel64_Family_6_Model_158_Stepping_10_GenuineIntel-3.6.5-64/lazylinker_ex. collect2.exe: error: ld returned 1 exit status_TrueStruct’